Transcript: lnc-NBPF11-1:37

Basic information

LNCipedia transcript ID: lnc-NBPF11-1:37 
LNCipedia gene ID: lnc-NBPF11-1
Ensembl Gene ID: ENSG00000227733
Ensembl Transcript ID: ENST00000614606
Location (hg38): chr1:148196098-148205749
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 513 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614606.4
Alternative gene names: ENSG00000227733.9; RP4-565E6.1; AC239809.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -150.654 non-coding 
CPAT coding probability 3.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF11-1:37 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NBPF24-1:13
4.1 lnc-NBPF24-1:13
5.0 lnc-NBPF24-1:13
5.1 lnc-PPIAL4G-29:36
5.2 lnc-NBPF11-1:37