Transcript: lnc-NBPF6-2:3

Basic information

LNCipedia transcript ID: lnc-NBPF6-2:3 
LNCipedia gene ID: lnc-NBPF6-2
Location (hg38): chr1:108200345-108202604
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2260 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA39:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -28.9646 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF6-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NBPF6-2:3
4.1 lnc-NBPF6-2:3
5.0 lnc-NBPF6-2:3
5.1 lnc-GSTM5-36:3
5.2 lnc-NBPF6-2:3