Transcript: lnc-NCALD-1:2

Basic information

LNCipedia transcript ID: lnc-NCALD-1:2 
LNCipedia gene ID: lnc-NCALD-1
Location (hg38): chr8:101490696-101493381
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2686 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1368:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 32.55 non-coding 
CPAT coding probability 7.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NCALD-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NCALD-1:2
4.1 lnc-NCALD-1:2
5.0 lnc-NCALD-1:2
5.1 lnc-ZNF706-18:1
5.2 lnc-NCALD-1:2