Transcript: lnc-NCKIPSD-1:6

Basic information

LNCipedia transcript ID: lnc-NCKIPSD-1:6 
LNCipedia gene ID: lnc-NCKIPSD-1
Location (hg38): chr3:48935596-48937657
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1768 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000502241
Alternative gene names: ENSG00000246870


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.4179 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NCKIPSD-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C3orf71-1:2
3.1 lnc-C3orf71-1:2
4.0 lnc-C3orf71-1:2
4.1 lnc-C3orf71-1:2
5.0 lnc-C3orf71-1:2
5.1 lnc-CELSR3-9:2
5.2 lnc-NCKIPSD-1:6