Transcript: lnc-NCKIPSD-2:2

Basic information

LNCipedia transcript ID: lnc-NCKIPSD-2:2 
LNCipedia gene ID: lnc-NCKIPSD-2
Location (hg38): chr3:48699362-48717193
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 464 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT089603
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.5431 non-coding 
CPAT coding probability 17.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NCKIPSD-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NCKIPSD-1:3
4.0 lnc-NCKIPSD-1:3
4.1 lnc-NCKIPSD-1:3
5.0 lnc-NCKIPSD-1:3
5.1 lnc-CELSR3-3:2
5.2 lnc-NCKIPSD-2:2