Transcript: lnc-NCOA3-4:2

Basic information

LNCipedia transcript ID: lnc-NCOA3-4:2 
LNCipedia gene ID: lnc-NCOA3-4
Location (hg38): chr20:47553643-47938039
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 19443 bp
Exons: 19
Sources: Nielsen et al.,2014
Alternative transcript names: l_2128_chr20:46182386-46183412_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.7875 non-coding 
CPAT coding probability 73.28% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NCOA3-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NCOA3-4:2
4.0 lnc-NCOA3-4:2
4.1 lnc-NCOA3-4:2
5.0 lnc-NCOA3-4:2
5.1 lnc-SNAI1-63:1
5.2 lnc-NCOA3-4:2