Transcript: lnc-NDFIP2-31:1

Basic information

LNCipedia transcript ID: lnc-NDFIP2-31:1 
LNCipedia gene ID: lnc-NDFIP2-31
Location (hg38): chr13:80340044-80341009
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 447 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000015468.1|FTMT25100017583.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -74.6629 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NDFIP2-31:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NDFIP2-31:1
5.0 lnc-NDFIP2-31:1
5.1 lnc-COL4A2-197:1
5.2 lnc-NDFIP2-31:1