Transcript: lnc-NDUFB1-2:1

Basic information

LNCipedia transcript ID: lnc-NDUFB1-2:1 
LNCipedia gene ID: lnc-NDUFB1-2
Ensembl Gene ID: ENSG00000258481
Ensembl Transcript ID: ENST00000553537
Location (hg38): chr14:92253493-92263656
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 580 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553537; ENST00000553537.1; RP11-472N19.3-001; OTTHUMT00000412266.1; NONHSAT039315
Alternative gene names: ENSG00000258481; RP11-472N19.3; ENSG00000258481.1; OTTHUMG00000171197.1; AL133240.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.958 non-coding 
CPAT coding probability 7.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NDUFB1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NDUFB1-1:1
3.1 lnc-NDUFB1-1:1
4.0 lnc-NDUFB1-1:1
4.1 lnc-NDUFB1-1:1
5.0 lnc-NDUFB1-1:1
5.1 lnc-DICER1-26:1
5.2 lnc-NDUFB1-2:1