Transcript: lnc-NDUFB7-1:1

Basic information

LNCipedia transcript ID: lnc-NDUFB7-1:1 
LNCipedia gene ID: lnc-NDUFB7-1
Location (hg38): chr19:14563896-14564240
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 345 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000040401.1|FTMT27400000821.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 107.8807 coding 
CPAT coding probability 2.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NDUFB7-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NDUFB7-1:1
5.0 lnc-NDUFB7-1:1
5.1 lnc-PALM3-25:1
5.2 lnc-NDUFB7-1:1