Transcript: lnc-NDUFS6-7:1

Basic information

LNCipedia transcript ID: lnc-NDUFS6-7:1 
LNCipedia gene ID: lnc-NDUFS6-7
Location (hg38): chr5:2068941-2069417
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 305 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009836; NONHSAT100089
Alternative gene names: XLOC_004252; linc-C5orf38-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -65.1512 non-coding 
CPAT coding probability 1.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NDUFS6-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NDUFS6-5:1
3.1 lnc-NDUFS6-7:1
4.0 lnc-NDUFS6-7:1
4.1 lnc-NDUFS6-7:1
5.0 lnc-NDUFS6-7:1
5.1 lnc-CARD6-356:1
5.2 lnc-NDUFS6-7:1