Transcript: lnc-NECAP2-2:1

Basic information

LNCipedia transcript ID: lnc-NECAP2-2:1 
LNCipedia gene ID: lnc-NECAP2-2
Location (hg38): chr1:16514643-16515754
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1112 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT001130
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.8394 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NECAP2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL355149.1-2:2
4.0 lnc-AL355149.1-2:2
4.1 lnc-AL355149.1-2:2
5.0 lnc-AL355149.1-2:2
5.1 lnc-SZRD1-7:1
5.2 lnc-NECAP2-2:1