Transcript: lnc-NEDD4L-2:1

Basic information

LNCipedia transcript ID: lnc-NEDD4L-2:1 
LNCipedia gene ID: lnc-NEDD4L-2
Location (hg38): chr18:57803780-57806817
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2870 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000507923; TCONS_00026215; NONHSAT059466
Alternative gene names: ENSG00000249134; XLOC_012692; linc-NEDD4L-1; AC022724.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.7183 non-coding 
CPAT coding probability 11.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEDD4L-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NEDD4L-2:1
3.1 lnc-NEDD4L-2:1
4.0 lnc-NEDD4L-2:1
4.1 lnc-NEDD4L-2:1
5.0 lnc-NEDD4L-2:1
5.1 lnc-WDR7-15:2
5.2 lnc-NEDD4L-2:1