Transcript: lnc-NEK3-1:13

Basic information

LNCipedia transcript ID: lnc-NEK3-1:13 
LNCipedia gene ID: lnc-NEK3-1
Location (hg38): chr13:52169972-52194447
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1137 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT033972
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.9757 non-coding 
CPAT coding probability 1.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEK3-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEK3-1:13
4.0 lnc-NEK3-1:13
4.1 lnc-NEK3-1:13
5.0 lnc-NEK3-1:13
5.1 lnc-CCDC169-189:12
5.2 lnc-NEK3-1:13