Transcript: lnc-NEK3-1:17

Basic information

LNCipedia transcript ID: lnc-NEK3-1:17 
LNCipedia gene ID: lnc-NEK3-1
Location (hg38): chr13:52175639-52194378
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 920 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT033974
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.4956 non-coding 
CPAT coding probability 7.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEK3-1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEK3-1:17
4.0 lnc-NEK3-1:17
4.1 lnc-NEK3-1:17
5.0 lnc-NEK3-1:17
5.1 lnc-CCDC169-189:17
5.2 lnc-NEK3-1:17