Transcript: lnc-NES-2:3

Basic information

LNCipedia transcript ID: lnc-NES-2:3 
LNCipedia gene ID: lnc-NES-2
Ensembl Gene ID: ENSG00000272068
Ensembl Transcript ID: ENST00000606343
Location (hg38): chr1:156637783-156641004
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3222 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606343.1
Alternative gene names: ENSG00000272068.1; RP11-284F21.9; AL365181.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.3818 non-coding 
CPAT coding probability 10.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NES-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NES-3:1
4.0 lnc-NES-3:1
4.1 lnc-NES-2:3
5.0 lnc-NES-2:3
5.1 lnc-PAQR6-16:3
5.2 lnc-NES-2:3