Transcript: lnc-NEURL3-1:1

Basic information

LNCipedia transcript ID: lnc-NEURL3-1:1 
LNCipedia gene ID: lnc-NEURL3-1
Location (hg38): chr2:96527943-96532306
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 437 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00002757
Alternative gene names: XLOC_002211; linc-SNRNP200-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.4326 non-coding 
CPAT coding probability 3.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEURL3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KANSL3-1:1
3.1 lnc-KANSL3-1:2
4.0 lnc-KANSL3-1:2
4.1 lnc-KANSL3-1:2
5.0 lnc-KANSL3-1:2
5.1 lnc-ZNF514-52:1
5.2 lnc-NEURL3-1:1