Transcript: lnc-NEURL3-1:2

Basic information

LNCipedia transcript ID: lnc-NEURL3-1:2 
LNCipedia gene ID: lnc-NEURL3-1
Ensembl Gene ID: ENSG00000235480
Ensembl Transcript ID: ENST00000425578
RefSeq ID: NR_135564
Location (hg38): chr2:96527940-96532306
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 440 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000425578.1; RP11-363D14.1-001; OTTHUMT00000343054.1; NONHSAT072568; NR_135564.1
Alternative gene names: ENSG00000235480.1; RP11-363D14.1; OTTHUMG00000156116.1; AC013270.1; LOC105373496


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.4326 non-coding 
CPAT coding probability 3.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEURL3-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KANSL3-1:1
4.0 lnc-KANSL3-1:1
4.1 lnc-KANSL3-1:1
5.0 lnc-KANSL3-1:1
5.1 lnc-ZNF514-52:2
5.2 lnc-NEURL3-1:2