Transcript: lnc-NEURL4-1:7

Basic information

LNCipedia transcript ID: lnc-NEURL4-1:7 
LNCipedia gene ID: lnc-NEURL4-1
Location (hg38): chr17:7312661-7319075
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2349 bp
Exons: 19
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000315601.4; RP11-542C16.2-001; OTTHUMT00000440663.1
Alternative gene names: ENSG00000261915.1; RP11-542C16.2; OTTHUMG00000178134.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 3536.3562 coding 
CPAT coding probability 99.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NEURL4-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPS2-1:2
4.0 lnc-GPS2-1:2
4.1 lnc-GPS2-1:2
5.0 lnc-GPS2-1:2
5.1 lnc-YBX2-2:2
5.2 lnc-NEURL4-1:7