Transcript: lnc-NFAT5-5:1

Basic information

LNCipedia transcript ID: lnc-NFAT5-5:1 
LNCipedia gene ID: lnc-NFAT5-5
Location (hg38): chr16:69530911-69531427
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 517 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000027715.1|ENCT00000160268.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -165.2098 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NFAT5-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NFAT5-5:1
5.0 lnc-NFAT5-5:1
5.1 lnc-WWP2-8:1
5.2 lnc-NFAT5-5:1