Transcript: lnc-NFAT5-6:1

Basic information

LNCipedia transcript ID: lnc-NFAT5-6:1 
LNCipedia gene ID: lnc-NFAT5-6
Location (hg38): chr16:69726534-69732999
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6466 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262136.1|ENCT00000160304.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 34.9961 non-coding 
CPAT coding probability 2.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NFAT5-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-WWP2-1:2
5.0 lnc-WWP2-1:2
5.1 lnc-WWP2-1:2
5.2 lnc-NFAT5-6:1