Transcript: lnc-NGF-2:1

Basic information

LNCipedia transcript ID: lnc-NGF-2:1 
LNCipedia gene ID: lnc-NGF-2
Location (hg38): chr1:115050445-115058425
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 464 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT005382
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 336.5973 coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NGF-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NGF-2:1
4.0 lnc-NGF-2:1
4.1 lnc-NGF-2:1
5.0 lnc-NGF-2:1
5.1 lnc-SIKE1-3:1
5.2 lnc-NGF-2:1