Transcript: lnc-NGFR-3:4

Basic information

LNCipedia transcript ID: lnc-NGFR-3:4 
LNCipedia gene ID: lnc-NGFR-3
RefSeq ID: NR_110883
Location (hg38): chr17:49361370-49380094
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 558 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110883; NR_110883.1
Alternative gene names: LOC102724596


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.2723 non-coding 
CPAT coding probability 2.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NGFR-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NGFR-3:4
4.0 lnc-NGFR-3:4
4.1 lnc-NGFR-3:4
5.0 lnc-NGFR-3:4
5.1 lnc-ACSF2-35:12
5.2 lnc-NGFR-3:4