Transcript: lnc-NGFR-3:5

Basic information

LNCipedia transcript ID: lnc-NGFR-3:5 
LNCipedia gene ID: lnc-NGFR-3
RefSeq ID: NR_110882
Location (hg38): chr17:49362382-49366115
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 624 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110882; NR_110882.1
Alternative gene names: LOC102724596


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 59.0891 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NGFR-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NGFR-3:5
4.0 lnc-NGFR-3:5
4.1 lnc-NGFR-3:5
5.0 lnc-NGFR-3:5
5.1 lnc-ACSF2-35:14
5.2 lnc-NGFR-3:5