Transcript: lnc-NGLY1-2:1

Basic information

LNCipedia transcript ID: lnc-NGLY1-2:1 
LNCipedia gene ID: lnc-NGLY1-2
Location (hg38): chr3:25718944-25730550
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2288 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT088715
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 905.8548 coding 
CPAT coding probability 25.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NGLY1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NGLY1-2:1
4.0 lnc-NGLY1-2:1
4.1 lnc-NGLY1-2:1
5.0 lnc-NGLY1-2:1
5.1 lnc-GADL1-33:1
5.2 lnc-NGLY1-2:1