Transcript: lnc-NGRN-2:1

Basic information

LNCipedia transcript ID: lnc-NGRN-2:1 
LNCipedia gene ID: lnc-NGRN-2
Ensembl Gene ID: ENSG00000275345
Ensembl Transcript ID: ENST00000610689
Location (hg38): chr15:90281858-90282270
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 413 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610689.1
Alternative gene names: ENSG00000275345.1; RP11-697E2.11; AC091167.6; AC091167.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.4668 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NGRN-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC091167.2-2:1
4.1 lnc-AC091167.2-2:1
5.0 lnc-AC091167.2-2:1
5.1 lnc-TTLL13P-2:1
5.2 lnc-NGRN-2:1