Transcript: lnc-NIM1K-3:3

Basic information

LNCipedia transcript ID: lnc-NIM1K-3:3 
LNCipedia gene ID: lnc-NIM1K-3
Location (hg38): chr5:43192270-43245201
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 516 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT101301
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.0842 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NIM1K-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC114947.1.1-3:3
4.0 lnc-AC114947.1.1-3:3
4.1 lnc-AC114947.1.1-3:3
5.0 lnc-AC114947.1.1-3:3
5.1 lnc-CARD6-46:3
5.2 lnc-NIM1K-3:3