Transcript: lnc-NIM1K-7:1

Basic information

LNCipedia transcript ID: lnc-NIM1K-7:1 
LNCipedia gene ID: lnc-NIM1K-7
Location (hg38): chr5:43103338-43129315
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 990 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc010ivk_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.3349 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NIM1K-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC114947.1.1-7:1
4.0 lnc-AC114947.1.1-7:1
4.1 lnc-AC114947.1.1-7:1
5.0 lnc-AC114947.1.1-7:1
5.1 lnc-CARD6-44:1
5.2 lnc-NIM1K-7:1