Transcript: lnc-NIT2-1:2

Basic information

LNCipedia transcript ID: lnc-NIT2-1:2 
LNCipedia gene ID: lnc-NIT2-1
Location (hg38): chr3:100361187-100361637
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 451 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000608041.1
Alternative gene names: ENSG00000273488.1; RP11-114I8.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.9103 non-coding 
CPAT coding probability 6.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NIT2-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NIT2-1:2
4.0 lnc-NIT2-1:2
4.1 lnc-NIT2-1:2
5.0 lnc-NIT2-1:2
5.1 lnc-TBC1D23-1:2
5.2 lnc-NIT2-1:2