Transcript: lnc-NKAIN3-9:3

Basic information

LNCipedia transcript ID: lnc-NKAIN3-9:3 
LNCipedia gene ID: lnc-NKAIN3-9
Location (hg38): chr8:63038952-63040916
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1965 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000099115.1|FTMT23200003143.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.659 non-coding 
CPAT coding probability 3.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NKAIN3-9:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NKAIN3-9:3
5.0 lnc-NKAIN3-9:3
5.1 lnc-SGK3-38:2
5.2 lnc-NKAIN3-9:3