Transcript: lnc-NKAP-4:5

Basic information

LNCipedia transcript ID: lnc-NKAP-4:5 
LNCipedia gene ID: lnc-NKAP-4
Location (hg38): chrX:119976874-120015560
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3420 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234493.1|FTMT28900030784.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.9268 non-coding 
CPAT coding probability 11.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NKAP-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NKAP-4:5
5.0 lnc-NKAP-4:5
5.1 lnc-CT47A8-12:5
5.2 lnc-NKAP-4:5