Transcript: lnc-NKD1-3:3

Basic information

LNCipedia transcript ID: lnc-NKD1-3:3 
LNCipedia gene ID: lnc-NKD1-3
Location (hg38): chr16:50407672-50408502
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 535 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024391; NONHSAT142410
Alternative gene names: XLOC_011716; linc-NKD1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -187.789 non-coding 
CPAT coding probability 3.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NKD1-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ADCY7-1:1
3.1 lnc-ADCY7-2:1
4.0 lnc-ADCY7-2:1
4.1 lnc-NKD1-3:3
5.0 lnc-NKD1-3:3
5.1 lnc-ADGRG1-139:2
5.2 lnc-NKD1-3:3