Transcript: lnc-NKX6-1-2:4

Basic information

LNCipedia transcript ID: lnc-NKX6-1-2:4 
LNCipedia gene ID: lnc-NKX6-1-2
Location (hg38): chr4:83796436-84284327
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 738 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT097229
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -240.1393 non-coding 
CPAT coding probability 6.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NKX6-1-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NKX6-1-2:4
4.0 lnc-NKX6-1-2:4
4.1 lnc-NKX6-1-2:4
5.0 lnc-NKX6-1-2:4
5.1 lnc-LIN54-17:4
5.2 lnc-NKX6-1-2:4