Transcript: lnc-NKX6-1-5:7

Basic information

LNCipedia transcript ID: lnc-NKX6-1-5:7 
LNCipedia gene ID: lnc-NKX6-1-5
Location (hg38): chr4:84536010-84582675
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 937 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000073012.1|MICT00000267556.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -54.6086 non-coding 
CPAT coding probability 2.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NKX6-1-5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NKX6-1-5:7
5.0 lnc-NKX6-1-5:7
5.1 lnc-LIN54-22:3
5.2 lnc-NKX6-1-5:7