Transcript: lnc-NLRP12-1:10

Basic information

LNCipedia transcript ID: lnc-NLRP12-1:10 
LNCipedia gene ID: lnc-NLRP12-1
Location (hg38): chr19:53874626-53875992
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 366 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232220.2|ENST00000413496.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.3844 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NLRP12-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NLRP12-1:10
5.0 lnc-NLRP12-1:10
5.1 lnc-TMC4-25:6
5.2 lnc-NLRP12-1:10