Transcript: lnc-NLRP2-2:2

Basic information

LNCipedia transcript ID: lnc-NLRP2-2:2 
LNCipedia gene ID: lnc-NLRP2-2
Ensembl Gene ID: ENSG00000267265
Ensembl Transcript ID: ENST00000586845
Location (hg38): chr19:55006205-55043251
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 553 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT067963; ENST00000586845.1
Alternative gene names: ENSG00000267265.1; CTC-550B14.7; ENSG00000267265.5; AC011476.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.0972 non-coding 
CPAT coding probability 16.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NLRP2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NLRP2-2:2
4.0 lnc-NLRP2-2:2
4.1 lnc-NLRP2-2:2
5.0 lnc-NLRP2-2:2
5.1 lnc-NLRP2-2:2
5.2 lnc-NLRP2-2:2