Transcript: lnc-NLRP3-7:2

Basic information

LNCipedia transcript ID: lnc-NLRP3-7:2 
LNCipedia gene ID: lnc-NLRP3-7
Location (hg38): chr1:247173376-247174449
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1074 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT010758; FPKM1_group_2726_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.1245 non-coding 
CPAT coding probability 5.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NLRP3-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NLRP3-7:2
4.0 lnc-NLRP3-7:2
4.1 lnc-NLRP3-7:2
5.0 lnc-NLRP3-7:2
5.1 lnc-OR2G3-8:2
5.2 lnc-NLRP3-7:2