Transcript: lnc-NLRP7-1:1

Basic information

LNCipedia transcript ID: lnc-NLRP7-1:1 
LNCipedia gene ID: lnc-NLRP7-1
RefSeq ID: NR_110738
Location (hg38): chr19:54769422-54771064
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 710 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110738; NR_110738.1
Alternative gene names: LOC101928804


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.0007 non-coding 
CPAT coding probability 31.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NLRP7-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC009892.10.1-1:2
4.0 lnc-AC009892.10.1-1:2
4.1 lnc-AC009892.10.1-1:2
5.0 lnc-AC009892.10.1-1:2
5.1 lnc-RDH13-9:1
5.2 lnc-NLRP7-1:1