Transcript: lnc-NLRP7-1:2

Basic information

LNCipedia transcript ID: lnc-NLRP7-1:2 
LNCipedia gene ID: lnc-NLRP7-1
RefSeq ID: NR_110737
Location (hg38): chr19:54769422-54771064
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 781 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110737; NR_110737.1
Alternative gene names: LOC101928804


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.0007 non-coding 
CPAT coding probability 16.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NLRP7-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC009892.10.1-1:1
4.0 lnc-AC009892.10.1-1:1
4.1 lnc-AC009892.10.1-1:1
5.0 lnc-AC009892.10.1-1:1
5.1 lnc-RDH13-9:2
5.2 lnc-NLRP7-1:2