Transcript: lnc-NME3-2:3

Basic information

LNCipedia transcript ID: lnc-NME3-2:3 
LNCipedia gene ID: lnc-NME3-2
Location (hg38): chr16:1713527-1714187
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 447 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261399.1|ENST00000570022.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -126.2891 non-coding 
CPAT coding probability 10.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NME3-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NME3-2:3
5.0 lnc-NME3-2:3
5.1 lnc-PKMYT1-80:3
5.2 lnc-NME3-2:3