Transcript: lnc-NME4-1:7

Basic information

LNCipedia transcript ID: lnc-NME4-1:7 
LNCipedia gene ID: lnc-NME4-1
Location (hg38): chr16:386763-387233
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 471 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT140308
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 231.3443 coding 
CPAT coding probability 98.73% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NME4-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NME4-1:7
4.0 lnc-NME4-1:7
4.1 lnc-NME4-1:7
5.0 lnc-NME4-1:7
5.1 lnc-DNASE1L2-113:8
5.2 lnc-NME4-1:7