Transcript: lnc-NMNAT3-1:7

Basic information

LNCipedia transcript ID: lnc-NMNAT3-1:7 
LNCipedia gene ID: lnc-NMNAT3-1
Location (hg38): chr3:139678422-139689330
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8713 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250543.1|MICT00000251417.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.8063 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NMNAT3-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NMNAT3-1:7
5.0 lnc-NMNAT3-1:7
5.1 lnc-NMNAT3-1:7
5.2 lnc-NMNAT3-1:7