Transcript: lnc-NOC4L-4:14

Basic information

LNCipedia transcript ID: lnc-NOC4L-4:14 
LNCipedia gene ID: lnc-NOC4L-4
Location (hg38): chr12:132277349-132278861
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1000 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000537762.1; RP13-895J2.3-001; OTTHUMT00000397394.1
Alternative gene names: ENSG00000256542.1; RP13-895J2.3; OTTHUMG00000167958.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.869 non-coding 
CPAT coding probability 3.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOC4L-4:14 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBRSL1-4:3
4.0 lnc-FBRSL1-4:3
4.1 lnc-FBRSL1-4:3
5.0 lnc-FBRSL1-4:3
5.1 lnc-NOC4L-5:10
5.2 lnc-NOC4L-4:14