Transcript: lnc-NOP56-1:3

Basic information

LNCipedia transcript ID: lnc-NOP56-1:3 
LNCipedia gene ID: lnc-NOP56-1
Location (hg38): chr20:2664274-2665874
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 950 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228293.1|ENST00000418739.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.2811 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOP56-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NOP56-1:3
5.0 lnc-NOP56-1:3
5.1 lnc-MAVS-22:2
5.2 lnc-NOP56-1:3