Transcript: lnc-NOP58-4:1

Basic information

LNCipedia transcript ID: lnc-NOP58-4:1 
LNCipedia gene ID: lnc-NOP58-4
Ensembl Gene ID: ENSG00000272966
Ensembl Transcript ID: ENST00000609491
Location (hg38): chr2:202336739-202337200
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 462 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609491.1
Alternative gene names: ENSG00000272966.1; RP11-686O6.1; AC064836.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -166.4747 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOP58-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NOP58-4:1
4.0 lnc-NOP58-4:1
4.1 lnc-NOP58-4:1
5.0 lnc-NOP58-4:1
5.1 lnc-NOP58-4:1
5.2 lnc-NOP58-4:1