Transcript: lnc-NOS1AP-1:1

Basic information

LNCipedia transcript ID: lnc-NOS1AP-1:1 
LNCipedia gene ID: lnc-NOS1AP-1
Location (hg38): chr1:162035205-162039499
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 329 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001180; NONHSAT007208
Alternative gene names: XLOC_000443; linc-NOS1AP


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -248.5306 non-coding 
CPAT coding probability 7.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOS1AP-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NOS1AP-1:1
3.1 lnc-NOS1AP-1:1
4.0 lnc-NOS1AP-1:1
4.1 lnc-NOS1AP-1:1
5.0 lnc-NOS1AP-1:1
5.1 lnc-PCP4L1-17:1
5.2 lnc-NOS1AP-1:1