Transcript: lnc-NOVA1-9:6

Basic information

LNCipedia transcript ID: lnc-NOVA1-9:6 
LNCipedia gene ID: lnc-NOVA1-9
Location (hg38): chr14:27632027-27673230
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 402 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA402:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.8162 non-coding 
CPAT coding probability 13.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOVA1-9:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NOVA1-9:6
4.1 lnc-NOVA1-9:6
5.0 lnc-NOVA1-9:6
5.1 lnc-EFS-70:3
5.2 lnc-NOVA1-9:6