Transcript: lnc-NPAP1-9:10

Basic information

LNCipedia transcript ID: lnc-NPAP1-9:10 
LNCipedia gene ID: lnc-NPAP1-9
Location (hg38): chr15:24257121-24280464
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1080 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023306; NONHSAT040889
Alternative gene names: XLOC_011174; linc-C15orf2-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.5731 non-coding 
CPAT coding probability 5.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPAP1-9:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C15orf2-9:8
3.1 lnc-C15orf2-9:10
4.0 lnc-C15orf2-9:10
4.1 lnc-C15orf2-9:10
5.0 lnc-C15orf2-9:10
5.1 lnc-SNRPN-16:10
5.2 lnc-NPAP1-9:10