Transcript: lnc-NPBWR1-12:12

Basic information

LNCipedia transcript ID: lnc-NPBWR1-12:12 
LNCipedia gene ID: lnc-NPBWR1-12
Location (hg38): chr8:51899649-51947173
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 936 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228801.5|ENST00000423716.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.0642 non-coding 
CPAT coding probability 18.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPBWR1-12:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC090186.1-1:14
5.0 lnc-AC090186.1-1:14
5.1 lnc-SDCBP-91:12
5.2 lnc-NPBWR1-12:12