Transcript: lnc-NPBWR1-4:3

Basic information

LNCipedia transcript ID: lnc-NPBWR1-4:3 
LNCipedia gene ID: lnc-NPBWR1-4
RefSeq ID: NR_134310
Location (hg38): chr8:52194362-52199552
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 796 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134310.1
Alternative gene names: LOC101929341


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -200.0949 non-coding 
CPAT coding probability 5.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPBWR1-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SDCBP-87:2
5.1 lnc-SDCBP-87:2
5.2 lnc-NPBWR1-4:3