Transcript: lnc-NPBWR1-7:5

Basic information

LNCipedia transcript ID: lnc-NPBWR1-7:5 
LNCipedia gene ID: lnc-NPBWR1-7
Location (hg38): chr8:52714551-52781933
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4317 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271555.1|MICT00000343828.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.9619 non-coding 
CPAT coding probability 2.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPBWR1-7:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NPBWR1-2:9
5.0 lnc-NPBWR1-2:9
5.1 lnc-SDCBP-124:5
5.2 lnc-NPBWR1-7:5